BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022C04LP1|AL427875
(849 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1111 1680 0.0
>3x_Contig1111
Length = 6610
Score = 1680 bits (847), Expect = 0.0
Identities = 848/849 (99%)
Strand = Plus / Minus
Query: 1 acaaagactacatcgagaagagattagcattgaataaactaggagaaaagtcccgtaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2308 acaaagactacatcgagaagagattagcattgaataaactaggagaaaagtcccgtaaag 2249
Query: 61 aattccaagctaagtttgataagaagaacaagtccacaaagaccactaaatctactaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2248 aattccaagctaagtttgataagaagaacaagtccacaaagaccactaaatctactaaga 2189
Query: 121 ggaaaggaccttctatcacggaacaactgacaaaaaagacaaagaaaacaaagtcttaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2188 ggaaaggaccttctatcacggaacaactgacaaaaaagacaaagaaaacaaagtcttaat 2129
Query: 181 actgcacctaaatatgtagaaataatgacagcatatgtattttaacctttttatttaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2128 actgcacctaaatatgtagaaataatgacagcatatgtattttaacctttttatttaatc 2069
Query: 241 agcagttctttcgttcttccaacattgaggtcaacaagcgaatgcttatcatatctatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2068 agcagttctttcgttcttccaacattgaggtcaacaagcgaatgcttatcatatctatgg 2009
Query: 301 aaaaaaaaaagttcaaccctatgtcagggatcgacgtaatatcgtctgcacaaacattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2008 aaaaaaaaaagttcaaccctatgtcagggatcgacgtaatatcgtctgcacaaacattta 1949
Query: 361 aagttttgatttttttgggtcgagggagttaagataagttcagtcgtgaaaatgggttcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1948 aagttttgatttttttgggtcgagggagttaagataagttcagtcgtgaaaatgggttcg 1889
Query: 421 aagtatttgtgtttgttttgttaactctttcggaatcgctacggtagtcaaagctcgaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1888 aagtatttgtgtttgttttgttaactctttcggaatcgctacggtagtcaaagctcgaaa 1829
Query: 481 gtaccactcacctagcttgttacattacaaatatctgtgtatttggtactgtattagggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1828 gtaccactcacctagcttgttacattacaaatatctgtgtatttggtactgtattagggt 1769
Query: 541 gcttttttcacattttgtttgcaatagagcaaagaaaagaacaaacacagaaatattata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1768 gcttttttcacattttgtttgcaatagagcaaagaaaagaacaaacacagaaatattata 1709
Query: 601 ttcactggaaggtttttagaacaagtggggcaattgttgtttttggataaacgtaagtwc 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1708 ttcactggaaggtttttagaacaagtggggcaattgttgtttttggataaacgtaagtac 1649
Query: 661 agagctcaactggacccatctgccaagctatgaatgatatggatactagaactgaaccta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1648 agagctcaactggacccatctgccaagctatgaatgatatggatactagaactgaaccta 1589
Query: 721 atgtccagctgacagagacaccaaagcttgcccagagagagtttgcaggaggagatgcgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1588 atgtccagctgacagagacaccaaagcttgcccagagagagtttgcaggaggagatgcgg 1529
Query: 781 agtcatcggtcaagaatcagcttccggagatcaattcgagtcttaatagagaggcaatcg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1528 agtcatcggtcaagaatcagcttccggagatcaattcgagtcttaatagagaggcaatcg 1469
Query: 841 atgttggta 849
|||||||||
Sbjct: 1468 atgttggta 1460
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8252
Number of Sequences: 1807
Number of extensions: 8252
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 849
length of database: 10,358,551
effective HSP length: 16
effective length of query: 833
effective length of database: 10,329,639
effective search space: 8604589287
effective search space used: 8604589287
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)